Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative electron transport complex protein, rnfe-like | CK234_02498 | Not Available | Negative | 3167287 - 3167871 | 20626.5 |
| putative electron transport complex protein, rnfg-like | CK234_02499 | Not Available | Negative | 3167886 - 3168680 | 27067.9 |
| putative electron transport complex protein, rnfd-like | CK234_02500 | Not Available | Negative | 3168677 - 3169666 | 35358.5 |
| putative electron transport complex protein, rnfc-like | CK234_02501 | Not Available | Negative | 3169681 - 3171018 | 47119.8 |
| rnfb-like electron transport complex protein | CK234_02502 | Not Available | Negative | 3171058 - 3172011 | 32597.8 |
| rsec/mucc-like positive regulator of sigma(e) | CK234_02503 | Not Available | Negative | 3172032 - 3172493 | 17038.1 |
| putative l-threonine dehydratase catabolic, tdcb-like | CK234_02504 | Not Available | Negative | 3172639 - 3173835 | 42410.4 |
| carboxylate/amino acid/amine transporter | CK234_02505 | Not Available | Negative | 3174032 - 3174946 | 33484.3 |
| multidrug resistance protein | CK234_02506 | Not Available | Negative | 3174978 - 3176168 | 43424.1 |
| glutamate decarboxylase | CK234_02507 | Not Available | Positive | 3176426 - 3177874 | 54672.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

