Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | CK234_00215 | Not Available | Negative | 300177 - 301979 | 66635.9 |
| alpha-xylosidase | CK234_00216 | Not Available | Negative | 301985 - 304231 | 86498.6 |
| right handed beta helix region | CK234_00217 | Not Available | Negative | 304242 - 304748 | 18842.0 |
| hypothetical protein | CK234_00218 | Not Available | Negative | 304757 - 306262 | 55347.8 |
| rho-like transcription termination factor | CK234_00219 | Not Available | Negative | 306375 - 308384 | 74282.5 |
| enamine/imine deaminase | CK234_00220 | Not Available | Positive | 308812 - 309189 | 13256.1 |
| hypothetical protein | CK234_00221 | Not Available | Positive | 309352 - 310542 | 45188.1 |
| beta-lactamase superfamily domain protein | CK234_00222 | Not Available | Positive | 310552 - 311343 | 30418.8 |
| lactoylglutathione lyase | CK234_00223 | Not Available | Positive | 311361 - 311738 | 14724.3 |
| protein of unknown function (duf3805) | CK234_00224 | Not Available | Positive | 311781 - 312614 | 31633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

