Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase a chain | CK234_02478 | Not Available | Positive | 3143152 - 3144858 | 61976.5 |
| potassium-transporting atpase b chain | CK234_02479 | Not Available | Positive | 3144892 - 3146925 | 72476.1 |
| potassium-transporting atpase c chain | CK234_02480 | Not Available | Positive | 3146939 - 3147508 | 20500.6 |
| hypothetical protein | CK234_02481 | Not Available | Positive | 3147782 - 3148483 | 25515.1 |
| had superfamily (subfamily ia) hydrolase protein | CK234_02482 | Not Available | Negative | 3148742 - 3149431 | 26385.9 |
| chloramphenicol acetyltransferase 3 | CK234_02483 | Not Available | Negative | 3149468 - 3150103 | 24088.7 |
| lysine-sensitive aspartokinase 3 | CK234_02484 | Not Available | Negative | 3150415 - 3151761 | 50704.7 |
| trehalose-phosphate synthase | CK234_02485 | Not Available | Positive | 3152122 - 3154347 | 85449.9 |
| trehalase | CK234_02486 | Not Available | Positive | 3154366 - 3156153 | 69848.9 |
| extended-spectrum beta-lactamase per-1 precursor | CK234_02487 | Not Available | Positive | 3156212 - 3157171 | 36198.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

