Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna n6-adenosine threonylcarbamoyltransferase | CK234_02468 | Not Available | Negative | 3133201 - 3134220 | 36941.3 |
| methionine aminopeptidase | CK234_02469 | Not Available | Negative | 3134244 - 3135098 | 31838.1 |
| winged helix-turn-helix domain (duf2582) | CK234_02470 | Not Available | Positive | 3135335 - 3135553 | 8234.71 |
| putative acetyltransferase | CK234_02471 | Not Available | Negative | 3135613 - 3136164 | 20098.3 |
| putative amino-acid metabolite efflux pump | CK234_02472 | Not Available | Negative | 3136177 - 3137085 | 34069.1 |
| putative glycine betaine/carnitine transport binding protein, gbuc precursor-like | CK234_02473 | Not Available | Negative | 3137230 - 3138072 | 31666.2 |
| opuab-like glycine betaine transport system permease protein | CK234_02474 | Not Available | Negative | 3138075 - 3138899 | 29538.8 |
| putative glycine betaine/carnitine transport atp-binding protein, gbua-like | CK234_02475 | Not Available | Negative | 3138896 - 3140122 | 45636.3 |
| nitrogen regulation protein nr(i) | CK234_02476 | Not Available | Positive | 3140424 - 3141761 | 49977.5 |
| o-acetyl-adp-ribose deacetylase | CK234_02477 | Not Available | Negative | 3142151 - 3142777 | 22652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

