Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf58 | CK234_02458 | Not Available | Negative | 3125304 - 3126173 | 33730.5 |
| magnesium chelatase atpase subunit d | CK234_02459 | Not Available | Negative | 3126423 - 3127418 | 37374.8 |
| hu-like dna-binding protein | CK234_02460 | Not Available | Negative | 3127703 - 3129133 | 52640.7 |
| hu-like dna-binding protein | CK234_02461 | Not Available | Negative | 3129159 - 3129431 | 10202.5 |
| putative ribosomal protein s12 methylthiotransferase, rimo-like | CK234_02462 | Not Available | Negative | 3129505 - 3130803 | 50104.2 |
| putative signal recognition particle receptor, ftsy-like | CK234_02463 | Not Available | Negative | 3130807 - 3131766 | 34716.9 |
| protein of unknown function (duf4295) | CK234_02464 | Not Available | Negative | 3131940 - 3132095 | 5827.19 |
| 50s ribosomal protein l33 2 | CK234_02465 | Not Available | Negative | 3132105 - 3132293 | 7205.97 |
| 50s ribosomal protein l28 | CK234_02466 | Not Available | Negative | 3132314 - 3132574 | 9789.04 |
| putative nicotinamide-nucleotide amidohydrolase, pncc-like | CK234_02467 | Not Available | Negative | 3132679 - 3133179 | 17534.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

