Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CK234_02448 | Not Available | Positive | 3114903 - 3116120 | 45948.8 |
| universal stress protein family protein | CK234_02449 | Not Available | Negative | 3116398 - 3117525 | 43153.9 |
| hypothetical protein | CK234_02450 | Not Available | Negative | 3117601 - 3117870 | 9982.98 |
| pap2 superfamily protein | CK234_02451 | Not Available | Negative | 3118000 - 3118707 | 26872.5 |
| tetratricopeptide repeat protein | CK234_02452 | Not Available | Negative | 3118718 - 3119536 | 30730.3 |
| oxygen tolerance | CK234_02453 | Not Available | Negative | 3119556 - 3121391 | 67647.8 |
| putative type iv pilus biogenesis/stability protein, pilw-like | CK234_02454 | Not Available | Negative | 3121431 - 3122138 | 27631.4 |
| von willebrand factor type a domain protein | CK234_02455 | Not Available | Negative | 3122148 - 3123170 | 37851.1 |
| von willebrand factor type a domain protein | CK234_02456 | Not Available | Negative | 3123183 - 3124181 | 37268.6 |
| oxygen tolerance | CK234_02457 | Not Available | Negative | 3124201 - 3125298 | 41517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

