Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc-like chromosome partition protein | CK234_02438 | Not Available | Negative | 3100188 - 3102719 | 95957.4 |
| hypothetical protein | CK234_02439 | Not Available | Negative | 3102724 - 3103362 | 25431.6 |
| putative conjugation system atpase, trag family-like | CK234_02440 | Not Available | Negative | 3103362 - 3104000 | 24202.2 |
| Trna-arg | Not Available | Not Available | Positive | 3104443 - 3104519 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3104537 - 3104613 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3104640 - 3104716 | Not Available |
| putative nte family protein, rssa-like | CK234_02444 | Not Available | Negative | 3104805 - 3107228 | 92047.8 |
| putative chaperone protein, htpg-like | CK234_02445 | Not Available | Negative | 3107244 - 3109289 | 78122.2 |
| clpc/mecb-like negative regulator of genetic competence | CK234_02446 | Not Available | Negative | 3109424 - 3111940 | 93935.9 |
| dna gyrase subunit a | CK234_02447 | Not Available | Positive | 3112305 - 3114872 | 96451.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

