Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine recombinase, xerc-like | CK234_02428 | Not Available | Positive | 3091473 - 3092279 | 31769.6 |
| hypothetical protein | CK234_02429 | Not Available | Positive | 3092412 - 3093359 | 36381.4 |
| chromosome segregation protein smc, primarily archaeal type | CK234_02430 | Not Available | Negative | 3093349 - 3094785 | 54568.4 |
| hypothetical protein | CK234_02431 | Not Available | Negative | 3095060 - 3095668 | 23178.5 |
| hypothetical protein | CK234_02432 | Not Available | Negative | 3095713 - 3096021 | 11745.1 |
| dna binding domain, excisionase family | CK234_02433 | Not Available | Negative | 3096024 - 3096362 | 12762.5 |
| hypothetical protein | CK234_02434 | Not Available | Negative | 3096768 - 3097631 | 32449.5 |
| protein of unknown function (duf5045) | CK234_02435 | Not Available | Negative | 3097646 - 3098416 | 28591.6 |
| putative modification methylase, rsri-like | CK234_02436 | Not Available | Negative | 3098485 - 3099255 | 29635.7 |
| hypothetical protein | CK234_02437 | Not Available | Negative | 3099466 - 3100191 | 27968.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

