Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine recombinase, xerc-like | CK234_02418 | Not Available | Positive | 3080271 - 3081425 | 43548.0 |
| helix-turn-helix protein | CK234_02419 | Not Available | Positive | 3081592 - 3081798 | 7842.45 |
| type i restriction enzyme r protein | CK234_02420 | Not Available | Positive | 3081865 - 3084225 | 89751.5 |
| putative type i restriction enzyme m protein | CK234_02421 | Not Available | Positive | 3084240 - 3085751 | 57545.2 |
| protein of unknown function (duf1016) | CK234_02422 | Not Available | Positive | 3085789 - 3086814 | 39603.0 |
| hypothetical protein | CK234_02423 | Not Available | Positive | 3086855 - 3087361 | 18713.9 |
| ecoki-like type i restriction enzyme specificity protein | CK234_02424 | Not Available | Positive | 3087377 - 3088960 | 60426.8 |
| ecoki-like type i restriction enzyme specificity protein | CK234_02425 | Not Available | Positive | 3088957 - 3089547 | 22013.0 |
| ecoki-like type i restriction enzyme specificity protein | CK234_02426 | Not Available | Positive | 3089559 - 3090095 | 20486.9 |
| type i restriction modification dna specificity domain protein | CK234_02427 | Not Available | Negative | 3090075 - 3091412 | 50520.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

