Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon tran protein (tigr03780) | CK234_02408 | Not Available | Negative | 3073606 - 3074451 | 32100.7 |
| hypothetical protein | CK234_02409 | Not Available | Negative | 3074464 - 3075063 | 23247.0 |
| hypothetical protein | CK234_02410 | Not Available | Negative | 3075113 - 3075448 | 13187.7 |
| conjugative transposon tram protein | CK234_02411 | Not Available | Negative | 3075461 - 3076606 | 42033.5 |
| phage n-6-adenine-methyltransferase | CK234_02412 | Not Available | Negative | 3076617 - 3077099 | 18418.2 |
| hypothetical protein | CK234_02413 | Not Available | Negative | 3077110 - 3077484 | 14483.5 |
| conjugative transposon trak protein | CK234_02414 | Not Available | Negative | 3077497 - 3078111 | 23609.8 |
| hypothetical protein | CK234_02415 | Not Available | Negative | 3078118 - 3078507 | 16077.3 |
| hypothetical protein | CK234_02416 | Not Available | Negative | 3078537 - 3078881 | 12528.4 |
| putative tyrosine recombinase, xerc-like | CK234_02417 | Not Available | Positive | 3079080 - 3080246 | 44169.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

