Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase domain predominantly from archaea | CK234_02398 | Not Available | Negative | 3064291 - 3065610 | 51287.9 |
| hypothetical protein | CK234_02399 | Not Available | Negative | 3065880 - 3066116 | 8826.74 |
| spo0j-like chromosome-partitioning protein | CK234_02400 | Not Available | Positive | 3066165 - 3067904 | 66616.4 |
| hypothetical protein | CK234_02401 | Not Available | Positive | 3068415 - 3068690 | 10812.0 |
| hypothetical protein | CK234_02402 | Not Available | Positive | 3068698 - 3068970 | 10283.9 |
| hypothetical protein | CK234_02403 | Not Available | Positive | 3069004 - 3069360 | 13268.0 |
| conjugative coupling factor trad, sxt/tol subfamily | CK234_02404 | Not Available | Negative | 3069478 - 3071664 | 83199.4 |
| dna-directed rna polymerase subunit alpha | CK234_02405 | Not Available | Negative | 3071668 - 3072405 | 28174.2 |
| hypothetical protein | CK234_02406 | Not Available | Negative | 3072419 - 3073075 | 24007.3 |
| hypothetical protein | CK234_02407 | Not Available | Negative | 3073097 - 3073609 | 19080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

