Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_02388 | Not Available | Negative | 3050348 - 3053467 | 115142.0 |
| hypothetical protein | CK234_02389 | Not Available | Positive | 3053546 - 3053761 | 8172.64 |
| arabinose operon regulatory protein | CK234_02390 | Not Available | Negative | 3053706 - 3054620 | 34414.4 |
| hypothetical protein | CK234_02391 | Not Available | Positive | 3054690 - 3055214 | 19852.3 |
| alpha-xylosidase | CK234_02392 | Not Available | Negative | 3055111 - 3057993 | 110019.0 |
| putative sensor histidine kinase, tods-like | CK234_02393 | Not Available | Negative | 3058431 - 3059939 | 56843.4 |
| hypothetical protein | CK234_02394 | Not Available | Positive | 3061001 - 3061777 | 30231.5 |
| single stranded dna-binding protein (ssb) | CK234_02395 | Not Available | Positive | 3062552 - 3062965 | 15133.8 |
| soj-like sporulation initiation inhibitor protein | CK234_02396 | Not Available | Positive | 3063204 - 3063959 | 27448.9 |
| hypothetical protein | CK234_02397 | Not Available | Positive | 3063966 - 3064220 | 9467.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

