Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rna polymerase sigma factor, sigm-like | CK234_00205 | Not Available | Positive | 283800 - 284354 | 21477.1 |
| hypothetical protein | CK234_00206 | Not Available | Positive | 284403 - 284687 | 11191.4 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00207 | Not Available | Positive | 284722 - 287823 | 113994.0 |
| susd family protein | CK234_00208 | Not Available | Positive | 287847 - 289643 | 68192.1 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00209 | Not Available | Positive | 290198 - 293347 | 116070.0 |
| susd family protein | CK234_00210 | Not Available | Positive | 293371 - 295146 | 67561.8 |
| histidine phosphatase superfamily (branch 2) | CK234_00211 | Not Available | Positive | 295161 - 296441 | 48854.5 |
| uroporphyrinogen decarboxylase | CK234_00212 | Not Available | Positive | 296591 - 297601 | 36530.2 |
| vitamin b12 dependent methionine synthase, activation domain | CK234_00213 | Not Available | Positive | 297594 - 298280 | 25351.2 |
| sodium/glucose cotransporter | CK234_00214 | Not Available | Negative | 298572 - 300143 | 57882.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

