Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/alanine antiporter | CK234_02378 | Not Available | Negative | 3037843 - 3039531 | 60780.7 |
| cobyrinic acid a,c-diamide synthase | CK234_02379 | Not Available | Positive | 3039767 - 3041095 | 49093.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CK234_02380 | Not Available | Positive | 3041092 - 3041667 | 22231.8 |
| cobyric acid synthase | CK234_02381 | Not Available | Positive | 3041667 - 3043157 | 55380.6 |
| threonine-phosphate decarboxylase | CK234_02382 | Not Available | Positive | 3043150 - 3044160 | 38747.6 |
| putative cobalamin biosynthesis protein, cobd-like | CK234_02383 | Not Available | Positive | 3044142 - 3045074 | 34501.9 |
| Trna-gly | Not Available | Not Available | Positive | 3045110 - 3045185 | Not Available |
| hypothetical protein | CK234_02385 | Not Available | Negative | 3045803 - 3047056 | 48858.8 |
| hypothetical protein | CK234_02386 | Not Available | Negative | 3047184 - 3047408 | 8780.61 |
| susd and ragb-like outer membrane lipoprotein | CK234_02387 | Not Available | Negative | 3048394 - 3050328 | 72997.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

