Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/alanine antiporter | CK234_02368 | Not Available | Negative | 3022679 - 3024367 | 60888.9 |
| putative propionyl-coa carboxylase beta chain 5 | CK234_02369 | Not Available | Negative | 3024493 - 3026025 | 55922.1 |
| glutaconyl-coa decarboxylase subunit gamma | CK234_02370 | Not Available | Negative | 3026028 - 3026552 | 18968.8 |
| biotin carboxylase | CK234_02371 | Not Available | Negative | 3026577 - 3028088 | 57207.9 |
| cysteine-rich cwc | CK234_02372 | Not Available | Negative | 3028054 - 3028305 | 9673.73 |
| anaerobic ribonucleoside-triphosphate reductase | CK234_02373 | Not Available | Positive | 3029017 - 3031110 | 80525.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | CK234_02374 | Not Available | Positive | 3031094 - 3031561 | 17754.3 |
| cbikp-like sirohydrochlorin cobaltochelatase precursor | CK234_02375 | Not Available | Negative | 3031611 - 3032807 | 45154.6 |
| colicin i receptor precursor | CK234_02376 | Not Available | Negative | 3032841 - 3034901 | 78267.4 |
| colicin i receptor precursor | CK234_02377 | Not Available | Negative | 3035273 - 3037450 | 81363.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

