Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | CK234_02358 | Not Available | Positive | 3007944 - 3009704 | 64568.6 |
| periplasmic binding protein | CK234_02359 | Not Available | Negative | 3009812 - 3010969 | 43492.4 |
| colicin i receptor precursor | CK234_02360 | Not Available | Negative | 3010983 - 3013160 | 81222.5 |
| hypothetical protein | CK234_02361 | Not Available | Positive | 3013599 - 3013979 | 13813.3 |
| colicin i receptor precursor | CK234_02362 | Not Available | Positive | 3014088 - 3016391 | 85921.1 |
| 5,10-methylenetetrahydrofolate reductase | CK234_02363 | Not Available | Positive | 3016688 - 3017641 | 35944.1 |
| ribonucleoside-diphosphate reductase subunit beta | CK234_02364 | Not Available | Negative | 3017732 - 3018781 | 41347.9 |
| ribonucleoside-diphosphate reductase 1 subunit alpha | CK234_02365 | Not Available | Negative | 3018944 - 3021463 | 95735.6 |
| hypothetical protein | CK234_02366 | Not Available | Negative | 3021866 - 3022075 | 7700.39 |
| hypothetical protein | CK234_02367 | Not Available | Negative | 3022102 - 3022659 | 21451.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

