Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-4 c(11)-methyltransferase | CK234_02348 | Not Available | Negative | 2996722 - 2998533 | 67020.4 |
| precorrin-6y c(5,15)-methyltransferase (decarboxylating) | CK234_02349 | Not Available | Negative | 2998555 - 2999736 | 44294.9 |
| cobalt-precorrin-3b c(17)-methyltransferase | CK234_02350 | Not Available | Negative | 2999741 - 3001147 | 51753.8 |
| flavoredoxin | CK234_02351 | Not Available | Negative | 3001805 - 3002365 | 20230.2 |
| flavodoxin | CK234_02352 | Not Available | Negative | 3002371 - 3002907 | 19869.9 |
| hypothetical protein | CK234_02353 | Not Available | Positive | 3003042 - 3003215 | 6467.18 |
| protein of unknown function (duf1016) | CK234_02354 | Not Available | Negative | 3003207 - 3004310 | 42588.9 |
| putative n-acetyltransferase, yafp-like | CK234_02355 | Not Available | Negative | 3004457 - 3005257 | 30582.8 |
| btr-like hth-type transcriptional activator | CK234_02356 | Not Available | Positive | 3005930 - 3006838 | 35423.5 |
| ysirk-targeted surface antigen transcriptional regulator | CK234_02357 | Not Available | Positive | 3006870 - 3007757 | 34077.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

