Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative multidrug resistance protein, mdtn-like | CK234_02318 | Not Available | Positive | 2960037 - 2960933 | 33034.6 |
| putative abc transporter atp-binding protein, ybhf-like | CK234_02319 | Not Available | Positive | 2960942 - 2962396 | 54478.0 |
| putative inner membrane transport permease, ybhr-like | CK234_02320 | Not Available | Positive | 2962420 - 2963526 | 41478.5 |
| putative inner membrane transport permease, ybhr-like | CK234_02321 | Not Available | Positive | 2963539 - 2964645 | 41604.2 |
| transaldolase | CK234_02322 | Not Available | Positive | 2964742 - 2965398 | 23527.5 |
| arabinose operon regulatory protein | CK234_02323 | Not Available | Positive | 2965550 - 2966473 | 36234.9 |
| hypothetical protein | CK234_02324 | Not Available | Negative | 2966548 - 2967375 | 31907.4 |
| penicillin-binding protein 1a | CK234_02325 | Not Available | Negative | 2967582 - 2969909 | 88345.2 |
| aspartate carbamoyltransferase | CK234_02326 | Not Available | Positive | 2970070 - 2971011 | 36259.7 |
| aspartate carbamoyltransferase regulatory chain | CK234_02327 | Not Available | Positive | 2971020 - 2971487 | 17408.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

