Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 1,4-alpha-glucan branching enzyme, glgb-like | CK234_02308 | Not Available | Negative | 2949935 - 2951962 | 78087.2 |
| putative toxin-antitoxin biofilm protein, taba-like | CK234_02309 | Not Available | Negative | 2951991 - 2952431 | 16248.5 |
| hypothetical protein | CK234_02310 | Not Available | Negative | 2952468 - 2953133 | 25881.7 |
| inositol-1-monophosphatase | CK234_02311 | Not Available | Negative | 2953209 - 2954021 | 30097.8 |
| morn repeat protein | CK234_02312 | Not Available | Negative | 2954005 - 2955123 | 42496.8 |
| peptidase m16 inactive domain protein | CK234_02313 | Not Available | Negative | 2955195 - 2956481 | 48625.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CK234_02314 | Not Available | Negative | 2956482 - 2957240 | 28075.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CK234_02315 | Not Available | Positive | 2957319 - 2957693 | 14212.0 |
| fatty acid metabolism regulator protein | CK234_02316 | Not Available | Positive | 2958099 - 2958755 | 25442.0 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_02317 | Not Available | Positive | 2958752 - 2960050 | 49762.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

