Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | CK234_02298 | Not Available | Negative | 2940961 - 2941977 | 38857.2 |
| amp nucleosidase | CK234_02299 | Not Available | Negative | 2941989 - 2942765 | 29142.2 |
| putative type i restriction enzyme r protein | CK234_02300 | Not Available | Positive | 2942895 - 2943272 | 14860.0 |
| c4-type zinc ribbon domain protein | CK234_02301 | Not Available | Negative | 2943373 - 2944164 | 30517.8 |
| putative gtp cyclohydrolase 1 type 2 | CK234_02302 | Not Available | Negative | 2944173 - 2945267 | 40621.9 |
| hypothetical protein | CK234_02303 | Not Available | Negative | 2945329 - 2945607 | 10839.2 |
| hypothetical protein | CK234_02304 | Not Available | Negative | 2945666 - 2946463 | 29543.7 |
| putative glutamine transport atp-binding protein, glnq-like | CK234_02305 | Not Available | Negative | 2946472 - 2947140 | 24472.8 |
| proline--trna ligase | CK234_02306 | Not Available | Negative | 2947175 - 2948665 | 56833.0 |
| hypothetical protein | CK234_02307 | Not Available | Negative | 2948780 - 2949931 | 44005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

