Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel family protein | CK234_00195 | Not Available | Positive | 259188 - 259832 | 24826.9 |
| abi-like protein | CK234_00196 | Not Available | Negative | 260178 - 261140 | 37710.6 |
| putative sensor histidine kinase, tmos-like | CK234_00197 | Not Available | Positive | 265080 - 269483 | 168817.0 |
| xylose isomerase-like tim barrel | CK234_00198 | Not Available | Positive | 269649 - 270533 | 33290.8 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00199 | Not Available | Positive | 270563 - 274018 | 126230.0 |
| susd family protein | CK234_00200 | Not Available | Positive | 274039 - 276048 | 75993.3 |
| hypothetical protein | CK234_00201 | Not Available | Positive | 276217 - 277950 | 64367.8 |
| protein of unknown function (duf3826) | CK234_00202 | Not Available | Positive | 278011 - 278643 | 23642.4 |
| hypothetical protein | CK234_00203 | Not Available | Positive | 278843 - 280525 | 61353.9 |
| hypothetical protein | CK234_00204 | Not Available | Positive | 280527 - 283613 | 115932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

