Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper transport repressor, copy/tcry family | CK234_02278 | Not Available | Positive | 2918029 - 2918394 | 14087.0 |
| tonb family c-terminal domain protein | CK234_02279 | Not Available | Positive | 2918417 - 2920267 | 69497.6 |
| putative septum site-determining protein, mind-like | CK234_02280 | Not Available | Negative | 2920335 - 2921438 | 39806.4 |
| trna (guanine-n(7)-)-methyltransferase | CK234_02281 | Not Available | Negative | 2921446 - 2922204 | 29773.6 |
| protein of unknown function (duf975) | CK234_02282 | Not Available | Negative | 2922327 - 2922953 | 23245.0 |
| branched-chain-amino-acid aminotransferase | CK234_02283 | Not Available | Negative | 2922971 - 2923990 | 37876.2 |
| exodeoxyribonuclease vii, small subunit | CK234_02284 | Not Available | Negative | 2924171 - 2924374 | 7823.46 |
| exodeoxyribonuclease 7 large subunit | CK234_02285 | Not Available | Negative | 2924383 - 2925690 | 49535.8 |
| subtilisin dy | CK234_02286 | Not Available | Negative | 2925690 - 2927063 | 49976.9 |
| putative multidrug export protein, mepa-like | CK234_02287 | Not Available | Positive | 2927185 - 2928555 | 49490.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

