Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | CK234_02268 | Not Available | Positive | 2906550 - 2907851 | 52313.9 |
| parb-like nuclease domain protein | CK234_02269 | Not Available | Positive | 2907848 - 2908360 | 19744.9 |
| hypothetical protein | CK234_02270 | Not Available | Positive | 2908388 - 2910172 | 65156.6 |
| malate dehydrogenase | CK234_02271 | Not Available | Negative | 2910270 - 2911211 | 32849.0 |
| hypothetical protein | CK234_02272 | Not Available | Positive | 2911368 - 2912240 | 33451.4 |
| putative outer membrane protein, tolc precursor-like | CK234_02273 | Not Available | Positive | 2912456 - 2913919 | 53453.8 |
| putative multidrug export protein, emra-like | CK234_02274 | Not Available | Positive | 2913946 - 2914932 | 35945.9 |
| abc-2 family transporter protein | CK234_02275 | Not Available | Positive | 2914939 - 2916114 | 44227.0 |
| yhge/pip n-terminal domain protein | CK234_02276 | Not Available | Positive | 2916129 - 2917379 | 47511.7 |
| putative lipoprotein, nlpe precursor-like | CK234_02277 | Not Available | Positive | 2917415 - 2917843 | 15858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

