Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative efflux pump periplasmic linker, ttga precursor-like | CK234_02258 | Not Available | Negative | 2891456 - 2892661 | 43436.1 |
| nadp-dependent malic enzyme | CK234_02259 | Not Available | Positive | 2893119 - 2895404 | 84255.2 |
| hypothetical protein | CK234_02260 | Not Available | Positive | 2895533 - 2895715 | 6785.8 |
| nad(p)-specific glutamate dehydrogenase | CK234_02261 | Not Available | Positive | 2895879 - 2897213 | 48972.7 |
| putative carbohydrate metabolism domain protein | CK234_02262 | Not Available | Positive | 2897369 - 2898517 | 42381.6 |
| outer membrane protein beta-barrel domain protein | CK234_02263 | Not Available | Positive | 2898526 - 2899302 | 29116.1 |
| protein of unknown function (duf4925) | CK234_02264 | Not Available | Negative | 2900159 - 2901364 | 43454.5 |
| phosphoenolpyruvate synthase | CK234_02265 | Not Available | Negative | 2901474 - 2904431 | 112937.0 |
| nad-specific glutamate dehydrogenase | CK234_02266 | Not Available | Positive | 2904666 - 2906003 | 48494.3 |
| hypothetical protein | CK234_02267 | Not Available | Positive | 2906165 - 2906560 | 15230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

