Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain protein | CK234_02216 | Not Available | Positive | 2851937 - 2853043 | 41865.3 |
| dna primase, catalytic core | CK234_02217 | Not Available | Positive | 2853150 - 2854037 | 33985.9 |
| hypothetical protein | CK234_02218 | Not Available | Positive | 2854129 - 2854725 | 22875.3 |
| protein of unknown function (duf4134) | CK234_02219 | Not Available | Positive | 2854727 - 2855050 | 11556.5 |
| protein of unknown function (duf4134) | CK234_02220 | Not Available | Positive | 2855114 - 2855536 | 15353.4 |
| hypothetical protein | CK234_02243 | Not Available | Positive | 2873742 - 2874170 | 15791.5 |
| hypothetical protein | CK234_02244 | Not Available | Positive | 2874258 - 2874554 | 11622.0 |
| hypothetical protein | CK234_02245 | Not Available | Positive | 2874588 - 2874794 | 7864.32 |
| galactoside o-acetyltransferase | CK234_02246 | Not Available | Positive | 2874791 - 2875324 | 19394.7 |
| peptidoglycan o-acetyltransferase | CK234_02247 | Not Available | Negative | 2875381 - 2876862 | 57248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

