Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02206 | Not Available | Positive | 2842111 - 2842866 | 27678.0 |
| hypothetical protein | CK234_02207 | Not Available | Negative | 2843569 - 2844027 | 16817.7 |
| hypothetical protein | CK234_02208 | Not Available | Negative | 2843981 - 2845300 | 47420.6 |
| fimbrillin-like protein | CK234_02209 | Not Available | Negative | 2845366 - 2846436 | 39537.9 |
| fimbrillin-like protein | CK234_02210 | Not Available | Negative | 2846567 - 2847706 | 42246.0 |
| protein of unknown function (duf5119) | CK234_02211 | Not Available | Negative | 2847750 - 2848757 | 37815.5 |
| hypothetical protein | CK234_02212 | Not Available | Negative | 2848754 - 2849092 | 13021.2 |
| putative tyrosine recombinase, xerd-like | CK234_02213 | Not Available | Positive | 2849347 - 2850477 | 43139.5 |
| hypothetical protein | CK234_02214 | Not Available | Positive | 2850611 - 2851384 | 29305.3 |
| dna binding domain, excisionase family | CK234_02215 | Not Available | Positive | 2851585 - 2851959 | 14548.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

