Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maf-like septum formation protein | CK234_02186 | Not Available | Positive | 2821257 - 2821838 | 21744.3 |
| d-lactate dehydrogenase | CK234_02187 | Not Available | Positive | 2821905 - 2822912 | 37605.3 |
| protein of unknown function (duf3843) | CK234_02188 | Not Available | Negative | 2822909 - 2824078 | 45985.6 |
| protein of unknown function (duf2721) | CK234_02189 | Not Available | Positive | 2824197 - 2824586 | 14601.4 |
| putative inner membrane transport protein, ynfm-like | CK234_02190 | Not Available | Negative | 2824588 - 2825760 | 42673.6 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_02191 | Not Available | Positive | 2825826 - 2826359 | 20306.4 |
| hypothetical protein | CK234_02192 | Not Available | Negative | 2826493 - 2826855 | 13994.2 |
| hypothetical protein | CK234_02193 | Not Available | Negative | 2826955 - 2827242 | 11068.8 |
| tonb-dependent siderophore receptor | CK234_02194 | Not Available | Positive | 2827697 - 2830432 | 103889.0 |
| protein of unknown function (duf4876) | CK234_02195 | Not Available | Positive | 2830436 - 2831668 | 45462.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

