Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1282) | CK234_02166 | Not Available | Positive | 2802891 - 2803460 | 21095.2 |
| ssra-binding protein | CK234_02167 | Not Available | Positive | 2803460 - 2803912 | 17572.4 |
| methionine synthase | CK234_02168 | Not Available | Positive | 2803950 - 2806703 | 100901.0 |
| d-glycero-alpha-d-manno-heptose 1-phosphate guanylyltransferase | CK234_02169 | Not Available | Negative | 2806898 - 2807743 | 32185.8 |
| p-loop atpase protein family protein | CK234_02170 | Not Available | Negative | 2807740 - 2809170 | 55511.1 |
| putative xanthine permease, xanp-like | CK234_02171 | Not Available | Negative | 2809273 - 2810604 | 46614.3 |
| xanthine phosphoribosyltransferase | CK234_02172 | Not Available | Negative | 2810609 - 2811175 | 20888.7 |
| hypothetical protein | CK234_02173 | Not Available | Positive | 2811532 - 2811855 | 11757.4 |
| hypothetical protein | CK234_02174 | Not Available | Positive | 2812061 - 2812309 | 9341.14 |
| cyclo-malto-dextrinase c-terminal domain protein | CK234_02175 | Not Available | Negative | 2812753 - 2813001 | 9267.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

