Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | CK234_02096 | Not Available | Negative | 2736736 - 2738082 | 50932.1 |
| putative multidrug resistance protein, norm-like | CK234_02097 | Not Available | Negative | 2738176 - 2739441 | 46447.4 |
| aminopeptidase s | CK234_02098 | Not Available | Positive | 2739688 - 2741181 | 55015.9 |
| putative hth-type transcriptional repressor, ytra-like | CK234_02099 | Not Available | Negative | 2741279 - 2741644 | 14354.3 |
| hypothetical protein | CK234_02100 | Not Available | Negative | 2741641 - 2742531 | 33916.2 |
| putative abc transporter atp-binding protein, ytrb-like | CK234_02101 | Not Available | Negative | 2742546 - 2743388 | 31481.2 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_02102 | Not Available | Negative | 2743572 - 2744720 | 43793.3 |
| hypothetical protein | CK234_02103 | Not Available | Negative | 2744717 - 2744935 | 7991.74 |
| putative tyrosine recombinase, xerc-like | CK234_02104 | Not Available | Positive | 2745377 - 2746429 | 40030.5 |
| tir domain protein | CK234_02105 | Not Available | Negative | 2746541 - 2747062 | 19845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

