Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor sui1, putative, prokaryotic | CK234_02086 | Not Available | Positive | 2728268 - 2728633 | 13710.6 |
| elongation factor ts | CK234_02087 | Not Available | Negative | 2728692 - 2729681 | 35504.8 |
| 30s ribosomal protein s2 | CK234_02088 | Not Available | Negative | 2729814 - 2730653 | 30564.9 |
| 30s ribosomal protein s9 | CK234_02089 | Not Available | Negative | 2730786 - 2731172 | 14527.7 |
| 50s ribosomal protein l13 | CK234_02090 | Not Available | Negative | 2731179 - 2731640 | 17129.7 |
| hypothetical protein | CK234_02091 | Not Available | Negative | 2731940 - 2732185 | 9041.7 |
| zeta toxin | CK234_02092 | Not Available | Negative | 2732175 - 2732750 | 21483.9 |
| protein of unknown function (duf4488) | CK234_02093 | Not Available | Negative | 2733111 - 2733605 | 18600.8 |
| asparagine--trna ligase | CK234_02094 | Not Available | Negative | 2733768 - 2735171 | 53432.1 |
| ribosomal large subunit pseudouridine synthase b | CK234_02095 | Not Available | Negative | 2735194 - 2736660 | 56182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

