Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainCL10T00C06

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain CL10T00C06 BVCL10_contig0222, whole

Gene Summary

Adenine Count

1420826 bp

Thymine Count

1424215 bp

Guanine Count

1046299 bp

Cytosine Count

1024853 bp

Genome Length

4918368 bp

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor sui1, putative, prokaryoticCK234_02086Not AvailablePositive2728268 - 272863313710.6
elongation factor tsCK234_02087Not AvailableNegative2728692 - 272968135504.8
30s ribosomal protein s2CK234_02088Not AvailableNegative2729814 - 273065330564.9
30s ribosomal protein s9CK234_02089Not AvailableNegative2730786 - 273117214527.7
50s ribosomal protein l13CK234_02090Not AvailableNegative2731179 - 273164017129.7
hypothetical proteinCK234_02091Not AvailableNegative2731940 - 27321859041.7
zeta toxinCK234_02092Not AvailableNegative2732175 - 273275021483.9
protein of unknown function (duf4488)CK234_02093Not AvailableNegative2733111 - 273360518600.8
asparagine--trna ligaseCK234_02094Not AvailableNegative2733768 - 273517153432.1
ribosomal large subunit pseudouridine synthase bCK234_02095Not AvailableNegative2735194 - 273666056182.9

Displaying genes 2111 – 2120 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.