Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_02076 | Not Available | Positive | 2721559 - 2722434 | 33867.7 |
| guanylate kinase | CK234_02077 | Not Available | Positive | 2722481 - 2723050 | 21367.4 |
| hypothetical protein | CK234_02078 | Not Available | Positive | 2723055 - 2723237 | 6793.87 |
| nicotinate-nucleotide adenylyltransferase | CK234_02079 | Not Available | Positive | 2723219 - 2723791 | 22162.7 |
| duf3836 family of unknown function protein | CK234_02080 | Not Available | Negative | 2723874 - 2724344 | 18198.9 |
| putative metallophosphoesterase | CK234_02081 | Not Available | Negative | 2724572 - 2725411 | 31352.6 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | CK234_02082 | Not Available | Positive | 2725485 - 2726375 | 32692.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CK234_02083 | Not Available | Negative | 2726426 - 2726908 | 17475.2 |
| ureidoglycolate lyase | CK234_02084 | Not Available | Negative | 2726905 - 2727522 | 23340.1 |
| rex-like redox-sensing transcriptional repressor | CK234_02085 | Not Available | Negative | 2727527 - 2728177 | 24251.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

