Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| channel protein, hemolysin iii family | CK234_02066 | Not Available | Positive | 2710571 - 2711206 | 23650.2 |
| anaerobic ribonucleoside-triphosphate reductase | CK234_02067 | Not Available | Positive | 2711501 - 2713777 | 86287.2 |
| pyruvate formate-lyase 1-activating enzyme | CK234_02068 | Not Available | Positive | 2713783 - 2714241 | 17410.7 |
| putative zinc metalloprotease | CK234_02069 | Not Available | Negative | 2714816 - 2716159 | 50887.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | CK234_02070 | Not Available | Negative | 2716216 - 2717364 | 42392.3 |
| putative murein dd-endopeptidase, mepm-like | CK234_02071 | Not Available | Negative | 2717372 - 2718229 | 32093.4 |
| putative ribosome maturation factor, rimm-like | CK234_02072 | Not Available | Negative | 2718248 - 2718766 | 19831.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CK234_02073 | Not Available | Negative | 2718778 - 2720082 | 47644.1 |
| protein of unknown function (duf4290) | CK234_02074 | Not Available | Negative | 2720101 - 2720727 | 24903.9 |
| putative trna threonylcarbamoyladenosine biosynthesis protein, tsab-like | CK234_02075 | Not Available | Negative | 2720774 - 2721463 | 25285.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

