Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_00175 | Not Available | Negative | 233873 - 234046 | 6575.86 |
| Trna-cys | Not Available | Not Available | Positive | 234341 - 234415 | Not Available |
| ferrous iron transport protein b | CK234_00177 | Not Available | Negative | 234728 - 237196 | 92758.5 |
| trna(ile)-lysidine synthase | CK234_00178 | Not Available | Positive | 237317 - 238621 | 50064.5 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_00179 | Not Available | Negative | 238760 - 240394 | 58678.5 |
| putative trmh family trna/rrna methyltransferase | CK234_00180 | Not Available | Negative | 240431 - 241198 | 28167.3 |
| putative dna repair protein, recn-like | CK234_00181 | Not Available | Negative | 241249 - 242910 | 62006.0 |
| coabc-like coenzyme a biosynthesis bifunctional protein | CK234_00182 | Not Available | Negative | 243034 - 244230 | 43166.3 |
| putative dnaq family exonuclease/ding family helicase | CK234_00183 | Not Available | Negative | 244227 - 245003 | 29605.2 |
| dna polymerase iii subunit beta | CK234_00184 | Not Available | Negative | 245055 - 246179 | 41313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

