Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | CK234_02056 | Not Available | Negative | 2697823 - 2698710 | 32432.2 |
| d-galactonate transporter | CK234_02057 | Not Available | Negative | 2698738 - 2699898 | 41814.0 |
| levanase precursor | CK234_02058 | Not Available | Negative | 2699914 - 2701881 | 74285.3 |
| hypothetical protein | CK234_02059 | Not Available | Negative | 2701946 - 2704264 | 86968.6 |
| putative dna-binding protein, histone-like | CK234_02060 | Not Available | Positive | 2704900 - 2705511 | 23004.6 |
| prolipoprotein diacylglyceryl transferase | CK234_02061 | Not Available | Negative | 2705553 - 2706359 | 31284.6 |
| meso-diaminopimelate d-dehydrogenase | CK234_02062 | Not Available | Negative | 2706466 - 2707365 | 32272.8 |
| putative holliday junction atp-dependent dna helicase, ruva-like | CK234_02063 | Not Available | Positive | 2707541 - 2708134 | 21141.8 |
| hypothetical protein | CK234_02064 | Not Available | Negative | 2708222 - 2709046 | 30836.1 |
| multifunctional cca protein | CK234_02065 | Not Available | Positive | 2709064 - 2710566 | 57599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

