Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cation efflux system protein, cusc precursor-like | CK234_02046 | Not Available | Negative | 2683931 - 2685304 | 50317.8 |
| putative efflux pump membrane transporter, bepe-like | CK234_02047 | Not Available | Negative | 2685301 - 2688516 | 117313.0 |
| putative multidrug resistance protein, mdte precursor-like | CK234_02048 | Not Available | Negative | 2688525 - 2689697 | 42444.3 |
| putative 4-hydroxyphenylacetate catabolism regulatory protein, hpaa-like | CK234_02049 | Not Available | Positive | 2689788 - 2690621 | 32289.8 |
| fructose-bisphosphate aldolase | CK234_02050 | Not Available | Negative | 2690684 - 2691784 | 40244.3 |
| 50s ribosomal protein l31 type b | CK234_02051 | Not Available | Positive | 2692020 - 2692274 | 9656.59 |
| protein of unknown function (duf3256) | CK234_02052 | Not Available | Negative | 2692359 - 2693006 | 24349.6 |
| phenylacetate-coenzyme a ligase | CK234_02053 | Not Available | Positive | 2693120 - 2694418 | 49228.5 |
| act domain protein | CK234_02054 | Not Available | Positive | 2694430 - 2694858 | 15643.0 |
| putative sensor histidine kinase, tods-like | CK234_02055 | Not Available | Negative | 2694901 - 2697627 | 103092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

