Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b3/4 domain protein | CK234_02036 | Not Available | Negative | 2673677 - 2674336 | 24397.2 |
| putative laccase domain protein, yfih-like | CK234_02037 | Not Available | Negative | 2674376 - 2675158 | 28811.3 |
| obg-like gtpase | CK234_02038 | Not Available | Negative | 2675155 - 2676339 | 44180.3 |
| adenylate kinase | CK234_02039 | Not Available | Negative | 2676455 - 2677024 | 20885.2 |
| hypoxanthine phosphoribosyltransferase | CK234_02040 | Not Available | Negative | 2677065 - 2677601 | 20092.5 |
| bifunctional nad(p)h-hydrate repair enzyme nnr | CK234_02041 | Not Available | Positive | 2677721 - 2679256 | 56235.6 |
| protein of unknown function (duf4831) | CK234_02042 | Not Available | Positive | 2679293 - 2680342 | 38672.6 |
| d-galactonate transporter | CK234_02043 | Not Available | Negative | 2680424 - 2681812 | 51163.3 |
| protein of unknown function (duf3332) | CK234_02044 | Not Available | Positive | 2681986 - 2682537 | 19885.5 |
| protein of unknown function (duf4934) | CK234_02045 | Not Available | Positive | 2682618 - 2683850 | 46077.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

