Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | CK234_02026 | Not Available | Positive | 2663954 - 2665837 | 70662.0 |
| putative dna protecting protein, dpra-like | CK234_02027 | Not Available | Negative | 2665918 - 2667033 | 40940.4 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | CK234_02028 | Not Available | Negative | 2667030 - 2667437 | 15657.8 |
| pp_02000 | CK234_02029 | Not Available | Positive | 2667496 - 2668413 | Not Available |
| putative bifunctional purine biosynthesis protein, purh-like | CK234_02030 | Not Available | Positive | 2669107 - 2670384 | 47958.3 |
| outer membrane protein beta-barrel domain protein | CK234_02031 | Not Available | Negative | 2670482 - 2671153 | 24189.6 |
| outer membrane protein beta-barrel domain protein | CK234_02032 | Not Available | Negative | 2671299 - 2671904 | 21310.4 |
| outer membrane protein beta-barrel domain protein | CK234_02033 | Not Available | Negative | 2672108 - 2672644 | 19622.1 |
| hypothetical protein | CK234_02034 | Not Available | Negative | 2672849 - 2673040 | 6973.57 |
| putative murein hydrolase activator, nlpd precursor-like | CK234_02035 | Not Available | Negative | 2673044 - 2673667 | 22827.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

