Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | CK234_02006 | Not Available | Negative | 2636851 - 2637870 | 38970.9 |
| putative tyrosine recombinase, xerc-like | CK234_02007 | Not Available | Positive | 2638078 - 2639016 | 36160.6 |
| melibiose operon regulatory protein | CK234_02008 | Not Available | Positive | 2639826 - 2640320 | 19177.3 |
| hypothetical protein | CK234_02009 | Not Available | Positive | 2640365 - 2643292 | 106643.0 |
| hypothetical protein | CK234_02010 | Not Available | Positive | 2643381 - 2643902 | 19971.1 |
| colicin i receptor precursor | CK234_02011 | Not Available | Positive | 2644227 - 2646995 | 104197.0 |
| calcineurin-like phosphoesterase | CK234_02012 | Not Available | Positive | 2647006 - 2647977 | 37239.9 |
| putative inner membrane protein, yrbg-like | CK234_02013 | Not Available | Positive | 2648041 - 2649003 | 33528.8 |
| hypothetical protein | CK234_02014 | Not Available | Positive | 2649078 - 2650214 | 43814.1 |
| dna gyrase subunit b | CK234_02015 | Not Available | Positive | 2650245 - 2652122 | 70989.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

