Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | CK234_01996 | Not Available | Negative | 2625805 - 2626257 | 16476.0 |
| uvrc-like protein | CK234_01997 | Not Available | Negative | 2626415 - 2628235 | 69888.8 |
| adenine phosphoribosyltransferase | CK234_01998 | Not Available | Negative | 2628465 - 2628989 | 19189.4 |
| putative trna uridine 5-carboxymethylaminomethyl modification enzyme, mnmg-like | CK234_01999 | Not Available | Negative | 2629049 - 2630920 | 69589.1 |
| putative inner membrane protein, yqik-like | CK234_02000 | Not Available | Negative | 2631067 - 2632767 | 62444.3 |
| hypothetical protein | CK234_02001 | Not Available | Negative | 2632793 - 2633326 | 20260.5 |
| putative endoribonuclease, ybey-like | CK234_02002 | Not Available | Negative | 2633553 - 2633969 | 15837.9 |
| spore maturation protein b | CK234_02003 | Not Available | Negative | 2634014 - 2635246 | 44161.1 |
| dna-damage-inducible protein d | CK234_02004 | Not Available | Positive | 2635763 - 2636020 | 9707.39 |
| l,d-transpeptidase catalytic domain | CK234_02005 | Not Available | Negative | 2636051 - 2636848 | 29151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

