Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol acetyltransferase | CK234_01986 | Not Available | Negative | 2615847 - 2616503 | 25277.0 |
| prolipoprotein diacylglyceryl transferase | CK234_01987 | Not Available | Negative | 2616504 - 2617325 | 31477.1 |
| 2-dehydropantoate 2-reductase | CK234_01988 | Not Available | Negative | 2617322 - 2618233 | 33089.2 |
| putative ribosome-binding atpase, ychf-like | CK234_01989 | Not Available | Negative | 2618358 - 2619461 | 40815.9 |
| duf3836 family of unknown function protein | CK234_01990 | Not Available | Negative | 2619663 - 2620049 | 15047.1 |
| hypothetical protein | CK234_01991 | Not Available | Negative | 2620076 - 2620288 | 8022.03 |
| dna polymerase i | CK234_01992 | Not Available | Negative | 2620359 - 2623274 | 109277.0 |
| octaprenyl-diphosphate synthase | CK234_01993 | Not Available | Positive | 2623366 - 2624340 | 36285.5 |
| deoxyribose-phosphate aldolase | CK234_01994 | Not Available | Negative | 2624531 - 2625478 | 34798.2 |
| mazg-like nucleotide pyrophosphohydrolase domain protein | CK234_01995 | Not Available | Negative | 2625485 - 2625832 | 13382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

