Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 2603220 - 2603290 | Not Available |
| flavin reductase like domain protein | CK234_01977 | Not Available | Negative | 2603421 - 2603927 | 19380.2 |
| putative dna mismatch repair protein, muts-like | CK234_01978 | Not Available | Positive | 2604046 - 2606658 | 97854.5 |
| beta-hexosaminidase | Not Available | Not Available | Positive | 2606708 - 2608687 | 75348.0 |
| outer membrane protein beta-barrel domain protein | CK234_01980 | Not Available | Positive | 2608895 - 2609482 | 21953.3 |
| tetratricopeptide repeat protein | CK234_01981 | Not Available | Positive | 2609525 - 2611192 | 64219.7 |
| outer membrane protein beta-barrel domain protein | CK234_01982 | Not Available | Positive | 2611327 - 2612016 | 25278.3 |
| tetratricopeptide repeat protein | CK234_01983 | Not Available | Positive | 2612584 - 2614242 | 63832.9 |
| hypothetical protein | CK234_01984 | Not Available | Positive | 2614359 - 2614604 | 9220.3 |
| outer membrane protein beta-barrel domain protein | CK234_01985 | Not Available | Positive | 2614913 - 2615611 | 25718.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

