Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antiseptic resistance protein | CK234_01966 | Not Available | Negative | 2591766 - 2593142 | 49031.6 |
| s-adenosylmethionine synthase | CK234_01967 | Not Available | Positive | 2593420 - 2594712 | 47630.9 |
| putative log family protein, yvdd-like | CK234_01968 | Not Available | Positive | 2594827 - 2595414 | 21517.4 |
| protein of unknown function (duf4271) | CK234_01969 | Not Available | Positive | 2595411 - 2596223 | 31597.2 |
| putative uroporphyrinogen-iii synthase, hemd-like | CK234_01970 | Not Available | Positive | 2596228 - 2596977 | 28649.6 |
| ribonuclease p protein component, eubacterial | CK234_01971 | Not Available | Positive | 2597080 - 2597472 | 15158.8 |
| putative membrane protein insertion efficiency factor | CK234_01972 | Not Available | Positive | 2597469 - 2597690 | 8364.46 |
| putative deoxyribonuclease, ycfh-like | CK234_01973 | Not Available | Positive | 2597705 - 2598334 | 24010.2 |
| tyrosine--trna ligase | CK234_01974 | Not Available | Positive | 2598414 - 2599706 | 48043.5 |
| putative tricorn protease | CK234_01975 | Not Available | Negative | 2599831 - 2603085 | 121882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

