Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tspo/mbr family protein | CK234_00165 | Not Available | Positive | 224913 - 225377 | 18119.8 |
| iron-sulfur cluster repair di-iron protein | CK234_00166 | Not Available | Positive | 225504 - 226199 | 27000.4 |
| putative oxygen regulatory protein, nrec-like | CK234_00167 | Not Available | Positive | 226196 - 226807 | 22691.8 |
| lactate utilization protein a | CK234_00168 | Not Available | Positive | 227119 - 227859 | 27278.1 |
| lactate utilization protein b | CK234_00169 | Not Available | Positive | 227856 - 229223 | 51539.4 |
| lactate utilization protein c | CK234_00170 | Not Available | Positive | 229227 - 229814 | 21730.2 |
| pyruvate formate-lyase 1-activating enzyme | CK234_00171 | Not Available | Negative | 229916 - 230644 | 27977.5 |
| formate acetyltransferase | CK234_00172 | Not Available | Negative | 230713 - 233001 | 86329.9 |
| Trna-glu | Not Available | Not Available | Positive | 233145 - 233220 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 233572 - 233661 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

