Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | CK234_01956 | Not Available | Positive | 2580860 - 2581246 | 15150.3 |
| imidazolonepropionase | CK234_01957 | Not Available | Positive | 2581293 - 2582537 | 44889.3 |
| methenyltetrahydrofolate cyclohydrolase | CK234_01958 | Not Available | Positive | 2582558 - 2583181 | 22967.8 |
| histidine ammonia-lyase | CK234_01959 | Not Available | Positive | 2583216 - 2584712 | 55180.9 |
| isopentenyl-diphosphate delta-isomerase | CK234_01960 | Not Available | Positive | 2584831 - 2585331 | 19013.3 |
| putative family 109 glycosyl hydrolase | CK234_01961 | Not Available | Positive | 2586026 - 2587441 | 53451.8 |
| beta-carbonic anhydrase 1 | CK234_01962 | Not Available | Negative | 2587566 - 2588111 | 20139.8 |
| cyclic nucleotide-binding domain protein | CK234_01963 | Not Available | Negative | 2588296 - 2588880 | 22223.6 |
| acyltransferase family protein | CK234_01964 | Not Available | Negative | 2589725 - 2590867 | 43798.9 |
| endonuclease/exonuclease/phosphatase family protein | CK234_01965 | Not Available | Negative | 2590882 - 2591520 | 23733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

