Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acryloyl-coa reductase electron transfer subunit gamma | CK234_01946 | Not Available | Positive | 2569297 - 2570190 | 31873.2 |
| acryloyl-coa reductase electron transfer subunit beta | CK234_01947 | Not Available | Positive | 2570196 - 2571215 | 36698.3 |
| four helix bundle protein | CK234_01948 | Not Available | Positive | 2571251 - 2571631 | 14337.4 |
| acyl-coa dehydrogenase | CK234_01949 | Not Available | Positive | 2571673 - 2573379 | 63864.0 |
| histidine carboxylase pi chain | CK234_01950 | Not Available | Positive | 2573838 - 2574446 | 22182.6 |
| putative acyl-coenzyme a thioesterase, paai-like | CK234_01951 | Not Available | Negative | 2574526 - 2574936 | 14751.8 |
| muts2-like endonuclease | CK234_01952 | Not Available | Negative | 2574964 - 2576052 | 41096.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | CK234_01953 | Not Available | Positive | 2576117 - 2577334 | 46274.2 |
| urocanate hydratase | CK234_01954 | Not Available | Positive | 2577860 - 2579857 | 74552.1 |
| glutamate formiminotransferase | CK234_01955 | Not Available | Positive | 2579940 - 2580842 | 33343.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

