Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sensory/regulatory protein, rpfc-like | CK234_01936 | Not Available | Positive | 2556678 - 2558174 | 56817.7 |
| putative miniconductance mechanosensitive channel, ybdg-like | CK234_01937 | Not Available | Negative | 2558293 - 2559486 | 45216.9 |
| putative efflux pump membrane transporter, bepe-like | CK234_01938 | Not Available | Negative | 2559603 - 2562719 | 112523.0 |
| putative efflux pump periplasmic linker, bepf-like | CK234_01939 | Not Available | Negative | 2562724 - 2563854 | 41358.6 |
| putative outer membrane protein, oprm precursor-like | CK234_01940 | Not Available | Negative | 2563909 - 2565306 | 52018.1 |
| hypothetical protein | CK234_01941 | Not Available | Negative | 2565438 - 2565980 | 19666.0 |
| signal peptidase i | CK234_01942 | Not Available | Negative | 2566134 - 2566955 | 32028.7 |
| hypothetical protein | CK234_01943 | Not Available | Negative | 2566952 - 2567530 | 22821.9 |
| hypothetical protein | CK234_01944 | Not Available | Negative | 2567527 - 2568591 | 40208.2 |
| nveala protein | CK234_01945 | Not Available | Negative | 2568670 - 2568930 | 9561.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

