Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CK234_01906 | Not Available | Positive | 2508170 - 2510044 | 73361.7 |
| protein of unknown function (duf3244) | CK234_01907 | Not Available | Positive | 2510207 - 2510599 | 14489.4 |
| hypothetical protein | CK234_01908 | Not Available | Positive | 2510620 - 2510856 | 9326.37 |
| putative alpha-hemolysin translocation atp-binding protein, hlyb-like | CK234_01909 | Not Available | Positive | 2511011 - 2513212 | 83592.8 |
| putative type i secretion membrane fusion protein, hlyd family-like | CK234_01910 | Not Available | Positive | 2513262 - 2514404 | 43795.5 |
| hypothetical protein | CK234_01911 | Not Available | Positive | 2514438 - 2514638 | 7419.48 |
| putative antilisterial bacteriocin subtilosin biosynthesis protein, alba-like | CK234_01912 | Not Available | Positive | 2514616 - 2516127 | 58154.3 |
| nhlm bacteriocin system abc transporter, peptidase/atp-binding protein | CK234_01913 | Not Available | Positive | 2516120 - 2516701 | 23420.5 |
| outer membrane protein beta-barrel family protein | CK234_01914 | Not Available | Negative | 2516667 - 2517059 | 14719.8 |
| hypothetical protein | CK234_01915 | Not Available | Positive | 2517603 - 2518031 | 16291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

