Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | CK234_01896 | Not Available | Positive | 2495130 - 2495393 | 9251.19 |
| thiamine pyrophosphokinase | CK234_01897 | Not Available | Negative | 2495631 - 2496122 | 16349.5 |
| putative nicotinamide riboside transporter, pnuc-like | CK234_01898 | Not Available | Negative | 2496109 - 2496681 | 22114.5 |
| serine--trna ligase | CK234_01899 | Not Available | Positive | 2496801 - 2498075 | 47884.3 |
| l-fucose-proton symporter | CK234_01900 | Not Available | Positive | 2498215 - 2499432 | 43390.6 |
| glutamate synthase (nadph) small chain | CK234_01901 | Not Available | Positive | 2499615 - 2501912 | 82892.6 |
| protein of unknown function (duf4858) | CK234_01902 | Not Available | Positive | 2502323 - 2503093 | 29526.6 |
| resolvase, n terminal domain | CK234_01903 | Not Available | Positive | 2503323 - 2505137 | 70179.7 |
| hypothetical protein | CK234_01904 | Not Available | Positive | 2505186 - 2506040 | 33276.9 |
| hypothetical protein | CK234_01905 | Not Available | Positive | 2506302 - 2507210 | 34522.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

