Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf5063) | CK234_01886 | Not Available | Negative | 2482095 - 2482658 | 21633.7 |
| spoiiie-like dna translocase | CK234_01887 | Not Available | Positive | 2482763 - 2485228 | 91840.0 |
| putative outer membrane lipoprotein carrier protein, lola-like | CK234_01888 | Not Available | Positive | 2485245 - 2485859 | 22975.4 |
| thioredoxin reductase | CK234_01889 | Not Available | Positive | 2485929 - 2486876 | 34005.6 |
| protease 3 precursor | CK234_01890 | Not Available | Positive | 2486928 - 2489726 | 105306.0 |
| hypothetical protein | CK234_01891 | Not Available | Positive | 2489736 - 2491223 | 57462.9 |
| putative abc transporter atp-binding protein, yxlf-like | CK234_01892 | Not Available | Positive | 2491236 - 2491943 | 26402.7 |
| meps-like murein dd-endopeptidase/murein ld-carboxypeptidase precursor | CK234_01893 | Not Available | Positive | 2491940 - 2492452 | 19478.6 |
| putative pyrophosphatase, ppax-like | CK234_01894 | Not Available | Positive | 2492508 - 2494577 | 79713.3 |
| 50s ribosomal protein l21 | CK234_01895 | Not Available | Positive | 2494791 - 2495108 | 11743.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

