Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nucleoside permease, nupg-like | CK234_01876 | Not Available | Negative | 2471894 - 2473171 | 46736.2 |
| protein of unknown function (duf5024) | CK234_01877 | Not Available | Negative | 2473373 - 2473987 | 22972.6 |
| hypothetical protein | CK234_01878 | Not Available | Negative | 2474009 - 2474575 | 21072.0 |
| putative ecf rna polymerase sigma factor, sigw-like | CK234_01879 | Not Available | Negative | 2474566 - 2475036 | 18010.0 |
| aldose 1-epimerase precursor | CK234_01880 | Not Available | Negative | 2475223 - 2476362 | 42078.6 |
| putative rna polymerase sigma factor, sigv-like | CK234_01881 | Not Available | Positive | 2476996 - 2477541 | 20808.2 |
| hypothetical protein | CK234_01882 | Not Available | Positive | 2477538 - 2478776 | 47303.1 |
| ubiquinone biosynthesis o-methyltransferase | CK234_01883 | Not Available | Positive | 2478833 - 2479621 | 30974.2 |
| ribosomal rna large subunit methyltransferase i | CK234_01884 | Not Available | Negative | 2480274 - 2481458 | 44521.1 |
| ribonuclease d | CK234_01885 | Not Available | Negative | 2481448 - 2482098 | 24635.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

